CDS

Accession Number TCMCG081C38809
gbkey CDS
Protein Id XP_003635108.2
Location join(<2669..2854,3233..3325,3549..3587,6471..6560,6660..6762,6955..7035,7890..7966,8359..8439,9576..9667,10600..10726)
Gene LOC109121378
GeneID 109121378
Organism Vitis vinifera

Protein

Length 488aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_003635060.2
Definition PREDICTED: HIV Tat-specific factor 1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor U2AF-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13093        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
GATAACCCATCTACAAGAAGTGATGAATATAAGCCAGAAGAGATGACATTTTCAGTAGAAGAGGAAATCTTTCCAACCATTCAGGTTGCAGAAGACTCTGTGAAGGAAGTCAATGGCACTGATGTGGTTGAAGAAACAAAACATGATGCCAAGAGAAAATTGCCAGAACAGCAAGCAGAGAAGAAGGAAGCTAACAAACCTCCTGATAGTTGGTTCGATTTAAAAGTTAATACACATGTTTATGTGACCGGGTTGCCAGATGATGTTACTGTTGACGAGGTTGTGGAAGTATTTTCTAAGTGTGGGTTAATAAAGGAGGACCCTGAAACAAGAAGACCTCGTGTTAAGTTGTATATTGACAAGAACACAGGGAGAAAAAAGGGTGATGCACTTGTTTCATATCTGAAGGAACCATCAGTTGCTCTGGCCATCCAAATTTTGGATGGGACACCTCTAAGGCCGGTGGGCACGATTCCTATGTCAGTGACGCTAGCTAAGTTTGAGCAGAAAGGTGAGAAATTTGTAGCCAAACAAATAGACAAGAGAAAGAAAAAGAAACTCAAGAGGGTTGAAGACAAGATTCTTGGTTGGGGGGGCCATGATGATGCAAAGTTGTCAATTCCTGCTACTGTTGTTCTTCGGTATATGTTTACTCCTGCTGAAATGAGGGCTGATCCAAATTTACGTTCAGAACTAGAGGGAGATGTACAAGAGGAATGCATAAAACTTGGCTCAGTGGACTTGGTGAAGGTTTGTGAGAGTCACCCACAGGGTGTAGTTTTGGTAAAGTATAAGGATAGGAGGGATGCGCAGAAGTGCATAGAGTTGATGAATGGAAGATGGTTTGGTGGAAGGCAGATACATGCCAGTGAAGATGATGGTTCTGTCAACCATGCCTTGGTGCGGGATCTGGACGCAGATGCTGAACGGCTGGAGGCATTTGGCGCAGAGCTTGAAGATGAGTCTTAA
Protein:  
MSFPNSEDTHHQHQQQATGVDNCDEVGWYILGENQQNLGPYAFSELREHFLNGYLSENSLLWSEGRSDWQPLSSIPELTTAISQPGVDCSSAGPPINDEDEFEKWQKEVREAEALKNGSASGSVGGDFGDEDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVPQDNPSTRSDEYKPEEMTFSVEEEIFPTIQVAEDSVKEVNGTDVVEETKHDAKRKLPEQQAEKKEANKPPDSWFDLKVNTHVYVTGLPDDVTVDEVVEVFSKCGLIKEDPETRRPRVKLYIDKNTGRKKGDALVSYLKEPSVALAIQILDGTPLRPVGTIPMSVTLAKFEQKGEKFVAKQIDKRKKKKLKRVEDKILGWGGHDDAKLSIPATVVLRYMFTPAEMRADPNLRSELEGDVQEECIKLGSVDLVKVCESHPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLDADAERLEAFGAELEDES